Deep convolutional neural networks for pan-specific peptide-MHC class I binding prediction

BMC Bioinformatics

Table 2 Prediction results for HLA-I test subsets

(A) Summary of prediction results for 43 HLA-A test subsets
	DCNN	NetMHCPan	SMM	ANN	PickPocket
Mean	0.638	0.608	0.601	0.579	0.561
Median	0.696	0.667	0.667	0.667	0.625
Standard Deviation	0.230	0.267	0.250	0.286	0.318
(B) Summary of prediction results for 25 HLA-B test subsets
	DCNN	NetMHCPan	SMM	ANN	PickPocket
Mean	0.593	0.606	0.578	0.606	0.560
Median	0.667	0.625	0.615	0.643	0.593
Standard Deviation	0.286	0.286	0.302	0.290	0.277

ISSN: 1471-2105