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Table 7 Summary of the data and analysis in clustering breast cancer subtypes

From: Thresher: determining the number of clusters while removing outliers

Dataset

Sample #

Outlier #

Outlier percentage

Cluster #

GSE60785

55

10

18.18

2

GSE43358

57

5

8.77

3

GSE10810

58

0

0.00

6

GSE29431

66

2

3.03

9

GSE50939

71

1

1.41

2

GSE39004

72

9

12.50

4

GSE46184

74

8

10.81

4

GSE19177

75

2

2.67

4

GSE37145

76

0

0.00

7

GSE21921

85

3

3.53

6

GSE20711

90

18

20.00

7

GSE40115

92

1

1.09

5

GSE12622

103

0

0.00

7

GSE22093

103

3

2.91

5

GSE19783

115

1

0.87

8

GSE56493

120

6

5.00

6

GSE10885

125

4

3.20

7

GSE2607

126

3

2.38

7

GSE45255

139

10

7.19

8

GSE45827

155

9

5.81

6

GSE3143

158

6

3.80

7

GSE53031

167

10

5.99

6

GSE2741

169

7

4.14

6

GSE1992

170

8

4.71

8

GSE4611

218

23

10.55

9