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Fig. 2 | BMC Bioinformatics

Fig. 2

From: SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data

Fig. 2

Schematic representation of differences between the three count modes. The grey line represents a query sequence; red lines show overlapping CSEs in this sequence; circles illustrate distinct symbols (residues, base pairs, time points, etc.) the sequence consists of. The symbol-resolved mode counts presence of at least one symbol in a position; the gross mode counts how often each symbol position occurs; the enrichment mode is similar to the symbol-resolved mode but counts presence only if there are at least n symbols in a position

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BMC Bioinformatics

ISSN: 1471-2105

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