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Table 8 SvsNCS signature biological interpretation

From: Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

Gene name

Gene description

Chemical interaction

CLEC10A

C-type lectin domain containing 10A

Benzo(a)pyrene

GPR15

G protein-coupled receptor 15

Tobacco Smoke Pollution

B3GALT2

beta-1,3-galactosyltransferase 2

Tobacco Smoke Pollution, Tretinoin, Valproic Acid, Vehicle Emissions

CDKN1C

cyclin-dependent kinase inhibitor 1C (p57, Kip2)

Tetrachlorodibenzodioxin, tert-Butylhydroperoxide, Valproic Acid

DSC2

desmocollin 2

Tetrachlorodibenzodioxin, Valproic Acid

LRRN3

leucine rich repeat neuronal 3

Tobacco Smoke Pollution

AHRR

aryl-hydrocarbon receptor repressor; programmed cell death 6

Benzo(a)pyrene

TMEM163

transmembrane protein 163

Valproic Acid, Benzo(a)pyrene

PID1

phosphotyrosine interaction domain containing 1

Valproic Acid, Benzo(a)pyrene

FSTL1

follistatin-like 1

Methylnitronitrosoguanidine co-treated with Cadmium Chloride

P2RY6

pyrimidinergic receptor P2Y, G-protein coupled, 6

Benzo(a)pyrene

PTGFRN

prostaglandin F2 receptor inhibitor

Benzo(a)pyrene, Tetrachlorodibenzodioxin, Valproic Acid

ST6GALNAC1

ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

Acetaminophen, Clofibrate, Phenylmercuric Acetate

SASH1

SAM and SH3 domain containing 1

Benzo(a)pyrene

  1. Enrichment analysis of the proposed gene signature in the smokers versus non-current smokers case study