From: Bio-SimVerb and Bio-SimLex: wide-coverage evaluation sets of word similarity in biomedicine
Ontology | Reference |
---|---|
Chemical Entities of Biological Interest (ChEBI) | [53] |
Gene Ontology (GO) | |
NCI Thesaurus (NCIT) | [56] |
Foundational Model of Anatomy (FMA) | [57] |
Disease Ontology (DOID) | [58] |
Uberon multi-species anatomy ontology (UBERON) | |
Plant Ontology (PO) | |
Plant Phenotypes and Traits (PATO) | [63] |
Ontology for Biomedical Investigations(OBI) | [64] |
Molecular Process Ontology (MOP) | [65] |
Zebrafish anatomy and development (ZFA) | [66] |
Protein modification (PSI-MOD) | [67] |
Common Anatomy Reference Ontology (CARO) | [68] |
Xenopus anatomy and development (XAO) |