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Table 1 The HQI8 subset of amino acid indices from the AAindex database

From: Exploring the potential of 3D Zernike descriptors and SVM for protein–protein interface prediction

Entry name

Description

BLAM930101

Alpha helix propensity of position 44 in T4 lysozyme [99].

BIOV880101

Information value for accessibility; average fraction 35% [100].

MAXF760101

Normalized frequency of alpha-helix [101].

TSAJ990101

Volumes including the crystallographic waters using the ProtOr [102].

NAKH920108

AA composition of MEM of multi-spanning proteins [103].

CEDJ970104

Composition of amino acids in intracellular proteins (percent) [104].

LIFS790101

Conformational preference for all beta-strands [105].

MIYS990104

Optimized relative partition energies - method C [106].