Table 4 Results for 600 computational experiments using the Fast Development mode (FastDev)
From: Evaluation of reaction gap-filling accuracy by randomization
(1) # rxns removed | 1 | 2 | 5 | 10 | 20 | 50 |
(2) Rxns suggested are identical to rxns removed | 60 | 25 | 4 | 0 | 0 | 0 |
(3) No rxns suggested | 0 | 0 | 0 | 0 | 0 | 0 |
(4) Rxns suggested are a strict subset of rxns removed | 0 | 33 | 34 | 17 | 5 | 0 |
(5) # rxns suggested is equal to # rxns re-moved | 31 | 11 | 16 | 9 | 8 | 0 |
(6) # rxns suggested is less than # rxns re-moved | 0 | 19 | 32 | 59 | 80 | 98 |
(7) # rxns suggested is greater than # rxns removed | 9 | 12 | 14 | 15 | 7 | 2 |
(8) # cases where no solution was found | 0 | 0 | 0 | 0 | 0 | 0 |
Precision (%) | 63 | 68 | 75 | 76 | 74 | 72 |
Average precision (%) | 71 | |||||
Recall (%) | 65 | 54 | 59 | 59 | 58 | 58 |
Average recall (%) | 59 | |||||
# Solutions that do not show growth | 28 (5%) | |||||