From: The VAAST Variant Prioritizer (VVP): ultrafast, easy to use whole genome variant prioritization tool
Gene | VVP | CADD | SIFT |
---|---|---|---|
BRCA2 | 0.971 | 0.893 | 0.004 |
BRCA1 | 0.971 | 0.876 | 0.003 |
SCN1A | 0.966 | 0.914 | 0.277 |
MLH1 | 0.943 | 0.950 | 0.057 |
MSH2 | 0.984 | 0.973 | 0.050 |
LDLR | 0.989 | 0.890 | 0.033 |
DMD | 0.959 | 0.932 | 0.030 |
ATM | 0.957 | 0.953 | 0.021 |
FBN1 | 0.974 | 0.935 | 0.233 |
CFTR | 0.945 | 0.930 | 0.073 |
Utility (All ClinVar Variants) | |||
Coding | 0.970 | 0.900 | 0.792 |
Non-coding | 0.917 | 0.715 | 0.000 |
Both | 0.947 | 0.818 | 0.134 |