Hierarchical structural component modeling of microRNA-mRNA integration analysis

BMC Bioinformatics

Table 6 Markers selected by EN

Selected mRNA	Beta	Connected miRNA	Selected mRNA	Beta	Connected miRNA	Selected mRNA	Beta	Connected miRNA
NSD1	− 0.340	miR-206	NUP214	−0.103	miR-3064	TFCP2	0.216	miR-497
FRS2	−0.046	miR-206	TCP11	−0.077	miR-3064	KDM5B	0.040	miR-524
MGAT4A	0.004	miR-206	BCL2L13	−0.022	miR-3064	RNASEH2C	−0.043	miR-670
SLC8A1	0.022	miR-206	SLC16A10	−0.016	miR-3064	MAP3K10	0.163	miR-670
PI4KA	0.027	miR-206	GSG1	0.034	miR-3064	MAMDC2	0.395	miR-670
MATR3	0.034	miR-206	LRRC34	−0.159	miR-326	TCEB3	−0.286	miR-93
OSBPL8	0.088	miR-206	ZRANB3	−0.127	miR-326	RASL11B	0.036	miR-93
EMX2	−0.275	miR-222	AQP2	−0.037	miR-326	KIAA0087	0.182	miR-96
KIAA0430	−0.039	miR-222	CTRC	−0.007	miR-326	DRGX	0.249	miR-96
AXIN2	0.003	miR-222	MLEC	0.034	miR-362	HS3ST2	0.016	miR-100
PRUNE	0.013	miR-222	NOTCH1	0.003	miR-367	SYDE2	0.098	miR-107
SHISA9	0.016	miR-222	SH3PXD2A	0.014	miR-367	AKAP7	−0.207	miR-1297
SHC3	0.031	miR-222	PTDSS1	0.017	miR-372	FBXL2	−0.373	miR-133b
RBL1	0.044	miR-222	CATSPER4	0.002	miR-378	CLIP2	0.005	miR-141
SOCS1	0.053	miR-222	TRIM55	0.071	miR-378	LYPD3	0.188	miR-152
SH3BP4	0.057	miR-222	SLC35E2B	−0.128	miR-488	PAQR9	0.308	miR-152
BBC3	0.074	miR-222	SALL4	−0.080	miR-1271	SCN1A	0.017	miR-203
SEC23IP	0.077	miR-222	MAGI3	0.009	miR-1271	CCPG1	0.070	miR-211
ESR1	0.085	miR-222	PLCE1	0.198	miR-1271	BGN	−0.161	miR-32
DGKI	−0.003	miR-330-5p

ISSN: 1471-2105