Table 4 Overall text-mining performance with the residue filtering based on analysis of sentence parse tree
From: Natural language processing in text mining for structural modeling of protein complexes
Method of parse tree analysis | L tot | L int | Coverage (%) | Success (%) | Accuracy (%) | ΔN(0) | ΔN(1) |
|---|---|---|---|---|---|---|---|
Method 1. Scoring of the residue-containing sentence only | 222 | 173 | 38.3 | 29.9 | 77.9 | −13 | + 10 |
Method 2. Scoring of the residue-containing sentence and keyword spotting in the context sentences | 208 | 154 | 35.9 | 26.6 | 74.0 | −7 | + 3 |
Method 3. SVM model with scores of the residue-containing and context sentences | 182 | 146 | 31.4 | 25.2 | 80.2 | −27 | + 21 |