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Fig. 5 | BMC Bioinformatics

Fig. 5

From: TIA: algorithms for development of identity-linked SNP islands for analysis by massively parallel DNA sequencing

Fig. 5

Zygosity Profile Comparison at Identity-Linked Loci. Zygosity comparisons, using the identity-linked SNP island panel compiled with algorithms of this study, differentiated the genomes of fifteen individuals. A total of 116 SNP locations within 28 SNP islands were evaluated in the heatmap profile comparison with homozygous reference zygosity represented as a green band, heterozygous zygosity represented as a yellow band, and homozygous variant zygosity represented as a red band. The accompanying agglomerative hierarchical clustering dendrogram represents the Euclidean distance of profile relatedness between the individual SNP zygosity profiles, resulting in three branches denoted in the dendrogram as green, red, and black lines. Three clusters (a, c, and d) and one outlying singleton (b) were identified

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