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Table 2 Computing time [s] required for a single inference run on the given regulon

From: Genexpi: a toolset for identifying regulons and validating gene regulatory networks using time-course expression data

  SigB SigR Kallifidas et al. SigR Kim et al.
Genexpi 26 109 150
TD-Aracne 447 184 446
  1. Time taken to compute a possible regulations for a single regulon. All of the results were averaged across both the runs with the actual regulator profile and the runs with a randomly generated profile. All times in seconds