Table 1 Comparison of features in VIPER with other RNA-seq pipelines

Quality Control

X

X

X

X

SNP Detection

X

X

X

X

Fusion Gene Detection

X

X

Differential Expression

X

X

X

Pathway Analysis

X

X

X

Consolidated Report

X

X

Galaxy Based

X

Dependencies Packaged

X

X

X

Support New Species

X

X

Package Easy Update

X

X

Batch Correction

X

Virus Detection

X

Immunology Analysis

X