Fig. 10

Peak calling performance on Maize Epigenomics B73v3 Buckler Shoot DNS-seq data [55]. Top browser window (a) shows the biological range Chr1: 1,770,000–1,790,000. Bottom window (b) is a zoom in of range Chr1: 1,785,000–1,790,000. In each window, from top to bottom: first signal track is light digestion group (small fragment data only, color = blue). Segment tracks are enriched regions called by: iSeg(a): iSeg calls with bc = 1.0; iSeg(b): iSeg calls with bc = 2.0; iSeg(c): iSeg calls with bc = 3.0; MACS(a): MACS calls on the light digestion group, FDR = 0.05; MACS(b): MACS calls on the light digestion group, FDR = 0.01; MACS(c): MACS calls on the light digestion group, FDR = 0.001; SICER(a): SICER calls on the light digestion group with window size = 20 and gap size = 40; SICER(b): SICER calls on the light digestion group with window size = 30 and gap size = 60; SICER(c): SICER calls on the light digestion group with window size = 50 and gap size = 100