Skip to main content

Table 9 The feature importance in the first-stage models starting with RaptorX-Contact predictions

From: Identification of residue pairing in interacting β-strands from a predicted residue contact map

Window size 1st stage -Ridge -RaptorX -Ridge -RaptorX -DeepCNF -Map Features -Position Features
3 × 3 71.51% 71.02% 66.48% 13.04% 70.14% 71.34% 71.30%
5 × 5 71.70% 71.58% 66.77% 15.75% 70.50% 71.37% 71.37%
7 × 7 71.50% 71.47% 66.93% 17.95% 70.59% 71.31% 71.21%
9 × 9 71.43% 71.44% 66.70% 19.80% 70.39% 71.03% 71.08%
  1. The table lists F1-scores of the re-conducted cross-validation without the corresponding features