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Table 6 Improvement of HVSM compared with VSM, IntelliGO, TCSS, Resnik, Lin, Jiang, Schlicker, and SimGIC on the S. cerevisiae PPI datasets

From: An improved approach to infer protein-protein interaction based on a hierarchical vector space model

 

CC

BP

MF

 

Complete dataset

Partial dataset

Complete dataset

Partial dataset

Complete dataset

Partial dataset

VSM

3%

3%

6%

6%

4%

2%

IntelliGO

-5%

2%

-1%

7%

-10%

2%

TCSS

0%

0%

1%

2%

-1%

-2%

Resnik

0%

0%

2%

2%

0%

-2%

Lin

3%

2%

4%

4%

8%

7%

Jiang

4%

4%

5%

6%

11%

10%

Schlicker

2%

2%

3%

4%

8%

6%

SimGIC

3%

2%

6%

5%

4%

2%

  1. The unreliable results are in italic