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Table 4 Common over-represented motifs found in INBIA and PERA networks inferred from best methods. For each motif, the number of occurrences and relative p-values in INBIA and PERA networks are reported (CD = Cell Death, CP = Cell Proliferation, P = Phosphorylation, S = Signaling)

From: INBIA: a boosting methodology for proteomic network inference

Motif

Cancer type

INBIA

PERA

THCA

6256 (0.034)

7 (2.66E-04

LGG

10477 (0.039)

30 (3.86E-06)

THCA

4230 (0.042)

3 (0.001)

LGG

6086 (0.047)

24 (2.60E-06)

OV

4159 (0.048)

60 (3.28E-06)

THCA

2898 (0.047)

2 (0.003051681)

THCA

7039 (0.038)

7 (1.79E-05)