Test | nSig | nValidation | nTV | pTV(%) | nFV | pFV(%) |
---|
JointLRT | 51994 | 19806 | 5652 | 28.5 | 14154 | 71.5 |
KS | 10 | 3 | 1 | 33.3 | 2 | 66.7 |
AW | 12 | 5 | 2 | 40.0 | 3 | 60.0 |
iAW.Lev | 709 | 201 | 89 | 44.3 | 112 | 55.7 |
iAW.BF | 22 | 7 | 4 | 57.1 | 3 | 42.9 |
iAW.TM | 22 | 9 | 5 | 55.6 | 4 | 44.4 |
- nSig: the number of significant CpG sites detected in the training set of GSE107080 based on FDR adjusted p-value < 0.05;
- nValidation: the number of validated CpG sites in the validation set of GSE107080 based on unadjusted p-value < 0.05;
- nTV: the number of truly validated CpG sites with the same difference directions in means and variances between the two groups;
- pTV: \(=\frac {nTV}{nValidation}\), the proportion of significant CpG sites detected in the training set and truly validated in the validation set;
- nFV: the number of falsely validated CpG sites in validation set with inconsistent difference direction in means or variances between the two groups;
- pFV: \(=\frac {nFV}{nValidation}\), the proportion of significant CpG sites detected in the training set but falsely validated in the validation set