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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Genome-wide prediction of cis-regulatory regions using supervised deep learning methods

Fig. 2

Comparison of the supervised method (DECRES) and unsupervised methods (ChromHMM and Combined) on five FANTOM annotated test sets in radar charts (a) and significance tests (b). The ENCODE segmentations were downloaded from [66]. We relabelled the annotations of ChromHMM and Combined. For ChromHMM segmentations, the Tss, TssF, and PromF classes were merged to A-P; the Enh, EnhF, EnhW, EnhWF classes were merged to A-E; and the rest were denoted by BG. When processing the Combined annotations, TSS and PF were relabelled to A-P; E and WE were relabelled to A-E; and the rest to BG. The p-values in (b) were obtained from two-tailed Student’s t-test on all cell types. The signs of statistic values are indicated in brackets

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