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Table 2 Predictions that do not overlap with any high or low confidence annotation

From: Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi

a) Single-coding-exon predictions

   

#evidence

tpc = 0

0< tpc <1

tpc = 1

1

1 971 (11)

878 (14)

1 005 (137)

2

204 (19)

158 (8)

299 (55)

3

200 (16)

126 (5)

257 (92)

4

91 (17)

43 (9)

168 (83)

\(\sum \)

2 466 (63)

1 205 (36)

1 729 (367)

b) Multi-coding-exon predictions

   

#evidence

tie = 0

0< tie <1

tie = 1

1

9 671 (287)

942 (211)

1 681 (775)

2

283 (36)

86 (32)

456 (196)

3

155 (31)

64 (43)

382 (223)

4

142 (57)

55 (37)

302 (196)

\(\sum \)

10 251 (411)

1 147 (323)

2 821 (1 390)

  1. The numbers in parenthesis depict those predictions that are partially supported by any best BLAT hit of ESTs