Table 1 Sample from a final feature set. Note that it contains original features (OTUs with numerical identifiers) and high level taxa
From: Taxonomy-aware feature engineering for microbiome classification
s_obeum | 1075307 | 192066 | g_Coprococcus | g_Streptococcus | s_bromii | 360660 | class |
|---|---|---|---|---|---|---|---|
0.00 | 186.34 | 0.00 | 1925.47 | 186.34 | 0.00 | 124.22 | Cancer |
169.49 | 24.21 | 72.64 | 1573.85 | 145.28 | 605.33 | 72.64 | Normal |
105.26 | 105.26 | 0.00 | 526.32 | 1684.21 | 842.11 | 0.00 | Normal |
8.64 | 0.00 | 0.27 | 1578.41 | 2869.76 | 327.29 | 0.27 | Cancer |
0.00 | 299.63 | 299.63 | 786.52 | 636.70 | 0.00 | 0.00 | Cancer |
107.66 | 0.00 | 0.00 | 1148.33 | 2571.77 | 0.00 | 83.73 | Normal |
8.48 | 0.00 | 0.53 | 2575.43 | 341.47 | 715.25 | 0.00 | Cancer |
29.33 | 29.33 | 0.00 | 1261.00 | 87.98 | 821.11 | 29.33 | Normal |