BMC Bioinformatics

Table 1 Predicted CMS group by normalization method

From: Gene length corrected trimmed mean of M-values (GeTMM) processing of RNA-seq data performs similarly in intersample analyses while improving intrasample comparisons

	GeTMM
TMM	CMS1	CMS2	CMS3	CMS4	Mixed/indeterminate	Total
CMS1	46	0	0	0	7	53
CMS2	0	127	0	0	5	132
CMS3	0	0	23	0	0	23
CMS4	0	1	0	5	4	10
Mixed/indeterminate	3	14	6	0	22	45
Total	49	142	29	5	38	263

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ISSN: 1471-2105

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