Fig. 4

Intersection of four inversion datasets for individual NA12878. The four inversion datasets are labeled a. Validated (from InvFEST [5]); Delly (derived from Illumina sequence data by Sudmant, et al. [33]); Assembly (derived from a PacBio assembly by Pendleton, et al. [32] and npInv, derived from nanopore sequence data. (a) and (b) are for NAHR and NHEJ inversions, respectively. The number of inversions in the intersection is shown in the bar chart. The connected dots below the bar chart indicate which methods are included in each intersection. The mean size of inversions in the intersection is shown under each bar. Intersection containing both npInv and validated are highlight with blue. The total number of predicted inversion is shown on the bottom left. This figure was generated using ggplot2 [41] and modified version of UpSetR [42]