From: HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads
Avg. | HapCHAT | HapCol | WhatsHap | WhatsHap | HapCUT2 | ReFHap | ProbHap | FastHare |
---|---|---|---|---|---|---|---|---|
Cov. | Â | Â | cov. 15x | cov. 20x | Â | Â | Â | Â |
25 | 0.035 | 0.218 | 0.035 | 0.039 | 0.037 | 1.081 | 1.487 | 2.112 |
30 | 0.028 | 0.181 | 0.035 | 0.031 | 0.037 | 0.725 | 1.166 | 1.430 |
35 | 0.028 | 0.161 | 0.033 | 0.037 | 0.037 | 0.537 | 0.879 | 1.086 |
40 | 0.026 | 0.148 | 0.026 | 0.030 | 0.037 | 0.425 | - | 0.901 |
45 | 0.022 | 0.139 | 0.024 | 0.024 | 0.022 | 0.404 | - | 0.781 |
50 | 0.020 | 0.134 | 0.020 | 0.024 | 0.018 | 0.324 | - | 0.586 |
55 | 0.022 | 0.126 | 0.024 | 0.022 | 0.018 | 0.273 | - | 0.565 |
60 | 0.020 | 0.108 | 0.020 | 0.024 | 0.022 | 0.248 | - | 0.470 |