From: HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads
Avg. | HapCHAT | HapCol | WhatsHap | WhatsHap | HapCUT2 | ReFHap | ProbHap | FastHare |
---|---|---|---|---|---|---|---|---|
Cov. | Â | Â | cov. 15x | cov. 20x | Â | Â | Â | Â |
25 | 0.35 | 1.30 | 0.42 | 0.42 | 0.33 | 3.43 | 2.66 | 5.95 |
30 | 0.33 | 1.92 | 0.43 | 0.42 | 0.38 | 2.52 | 2.43 | 4.55 |
35 | 0.27 | 1.37 | 0.34 | 0.55 | 0.37 | 1.92 | 2.09 | 3.93 |
40 | 0.26 | 1.18 | 0.24 | 0.41 | 0.27 | 1.86 | - | 3.31 |
45 | 0.34 | 1.02 | 0.32 | 0.34 | 0.27 | 1.95 | - | 3.12 |
50 | 0.27 | 1.18 | 0.78 | 0.81 | 0.73 | 1.42 | - | 3.14 |
55 | 0.28 | 1.13 | 0.76 | 0.76 | 0.20 | 1.48 | - | 3.19 |
60 | 0.13 | 1.26 | 0.17 | 0.16 | 0.57 | 1.49 | - | 3.49 |