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Table 8 QAN50 results of the tools on real simulated datasets of Chromosome 1

From: HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads

Avg. HapCHAT HapCol WhatsHap WhatsHap HapCUT2 ReFHap ProbHap FastHare
Cov.    cov. 15x cov. 20x     
25 87890 85002 87581 87581 51183 50325 49121 45846
30 93454 87599 92831 92565 57323 56745 54412 52138
35 96311 92483 96167 95611 61204 60612 59047 56881
40 97810 95818 97810 97270 64979 64535 - 60748
45 100826 98674 100826 100826 68274 66973 - 64003
50 103348 100826 103348 103348 73159 73256 - 69457
55 105243 103348 106341 106341 74273 74402 - 71058
60 107121 105243 107569 107569 76497 76497 - 73256
  1. For each dataset, its row identified by its average coverage (Avg. Cov.). We report the results obtained by running the tools with maximum coverage 30 × for HapCHAT, 25 × for HapCol, 15 × and 20 × for WhatsHap. No maximum coverage was set for HapCUT2, ReFHap, ProbHap, and FastHare. The best result (highest value) for each dataset is boldfaced