Sample ID and coverage | Affected genes | Function of integration site | Integration breakpoints in the human genome | Integration breakpoints in HBV virus | Score | Identified by HGT-ID? |
---|---|---|---|---|---|---|
145 T (37×) | CCNE1 | intron | chr19: 30303492 | 1053 | 87.2 | yes |
CCNE1 | intron | chr19: 30303498 | 1819 | 87.2 | yes | |
177 T (43×) | SENP5 | intron | chr3: 196625752* | 1827* | – | no |
180 N (121×) | FN1 | intron | chr2: 216280279 | 1822 | 11.9 | yes |
186 T (36×) | KMT2B | exon | chr19: 36214005 | 2448 | 206.2 | yes |
KMT2B | exon | chr19: 36214017 | 1605 | 206.2 | yes | |
198 T (34×) | TERT | intron | chr5: 1269387 | 821 | 137.5 | yes |
TERT | intron | chr5: 1269405 | 1950 | 137.5 | yes | |
26 T (66×) | DUX4 | intron | chr18: 107920* | 670* | – | no |
200 T (32×) | CCNE1 | exon | chr19: 30315003 | 1798 | 51.4 | yes |
CCNE1 | downstream | chr19: 30315365 | 316 | 222.751 | yes | |
268 T (34×) | CCNE1 | upstream | chr19: 30298787 | 1931 | 155.2 | yes |
TERT | intron | chr5: 1291758 | 3175 | 134.3 | yes | |
TERT | intron | chr5: 1292403 | 354 | 134.3 | yes | |
43 T (33×) | SENP5 | intron | chr3: 196625710* | 1910* | – | no |
46 T (32×) | TERT | upstream | chr5: 1295367 | 751 | 34.4 | yes |
70 T (114×) | KMT2B | exon | chr19: 36212331 | 1931 | 1015.6 | yes |
KMT2B | exon | chr19: 36212311 | 227 | 1015.6 | yes | |
71 T (32×) | SENP5 | intron | chr3: 196625776* | 417* | – | no |
KMT2B | intron | chr19: 36213141 | 1884 | 10 | yes | |
KMT2B | intron | chr19: 36213136 | 619 | 10 | yes | |
95 T (35×) | KMT2B | exon | chr19: 36212564 | 2240 | 27.3 | yes |