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Table 3 ESES metrics from the sample dataset

From: trumpet: transcriptome-guided quality assessment of m6A-seq data

Sample ID

GEO

Percent of Region Enriched with Signal

Scale Factor

IP1

GSM1147020

13.23%

0.24

IP2

GSM1147022

11.93%

0.4

IP3

GSM1147024

13.62%

0.22

  1. We can see that the second IP sample (IP2) is substantially different from the other samples, which is consistent with the previous results. Reads are down-sampled to 10 million for a fair comparison among all the samples
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BMC Bioinformatics

ISSN: 1471-2105

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