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Table 1 Studies on outbreak reconstruction and their availability as software

From: outbreaker2: a modular platform for outbreak reconstruction

Study

Available as software

Study

Available as software

Cottam et al. [23]

✗

Numinnen et al. [24]

✗

Aldrin et al. [25]

✗

Hall et al. [11]

✓

Jombart et al. [26]

✓

Worby et al. [10]

✓

Ypma et al. [27]

✗

Lau et al. [12]

✗

Morelli et al. [28]

✗

Soubeyrand [29]

✗

Ypma et al. [6]

✗

De Maio et al. [13]

✓

Stadler et al. [30]

✓

Kenah et al. [31]

✗

Jombart et al. [7]

✓

Klinkenberg et al. [14]

✓

Didelot et al. [8]

✓

Worby et al. [32]

✗

Mollentze et al. [9]

✗

Didelot et al. [15]

✓