From: Phage spanins: diversity, topological dynamics and gene convergence
Family representative (No. of members) | Members |
---|---|
Embedded | |
 HK97 (32) | HK97, 2851, CUS-3, HK106, HK140, HK446, HK542, HK544, HK633, HK75, Hk022, P13374, P22, POCJ13, PS34, Phi20, Phi75, ST160, ST64T, Sf101, Stx2, c341, epsilon34, mEP234, mEPX1, mEp043_c-1, mEp213, mEp235, mEpX2, phi80, sf6, vB_SemP_Emek |
 Lambda (28) | Lambda, PhiES15, phiSG1, phiEt88, pSG3, SfI, ES18, Fels-1, Gifsy-2, ST64b, 1720a-02, 933 W, BP-4795, H-19B, Min27, Stx1, Stx2–86, Stx2-II, Stx2-I, Stx2_converting_phage_vB_EcoP_24B, TL-2011c, VT2-Sakai, YYZ-2008, cdtI, 21, DE3, HK629, HK630 |
 Bcep176 (15) | Bcep176, RSK1, SPC32H, SPC32N, SPN1S, SPN9TCW, TL-2011b, epsilon15, phiV10, BcepC6B, KS9, eiAU-183, PPpW-3, E1, phiPSA1 |
 HK620 (14) | HK620, PEp14, FSL_SP-058, FSL_SP-076, Pollock, Gifsy-1, FSL_SP-016, SE1, SPN3UB, ST104, mEp460, spn9CC, vB_SOSS_Oslo, ENT39118 |
 K11 (14) | K11, K30, KP32, MmP1b, vB_EamP-L1b, IME15b, phiSG-JL2b, phiYeO3–12b, vB_YenP_AP5b, EcoDS1b, K1Fb, PE3–1b, CR44bb, CR8b) |
 N4 (12) | N4, vB_EamP-S6, Bp4, EC1-UPM, JWAlpha, JWDelta, ECBP1, RG-2014, pSb-1, vB_EcoP_G7C, vB_EcoP_PhAPEC5, vB_EcoP_PhAPEC7 |
 T7 (11) | T7, 13a, R, T3, T7M, Vi06, Y, YpP-R, YpP-Y, YpsP-G, phiA1122 |
 Kvp1 (8) | 285P, BA14, Berlin, FE44, Kvp1, Yep-phi, Yepe2, YpP-G |
 Groups of 4 | (B3, JBD18, JBD67, JBD25), (KS5, Smp131, RSY1, phiRSA1), (phi15, PPpW-4, Phi-S1, phiIBB-PF7A) |
 Groups of 3 | (LIT1, Luz7, vB_PaeP_C2–10_Ab09), (phiE125, phi1026b, phi644–2), (M6, MP1412, YuA), (HK225, ZF40, mEp237), (BcepIL02, BcepMigl, ES2b) |
 Groups of 2 | (BcepMu, phiE255), (Bcep22, DC1), (F10, vB_PaeP_Tr60_Ab31), (phiPSA2, gh-1) |
 Singletons | vB_EcoM_ECO1230–10, N15, Ecp1, ECML-117, PY54, BcepB1A, F116, S1, phiW-14, Cr30, Xfas53, Eta, phiPLPE |
Overlapped | |
 Jerseya (27) | Jersey, FSL_SP-101, K1G, K1H, K1ind1, K1ind2, K1ind3, L13, SE2, SETP13, SETP3, SETP7, SS3e, vB_SenS-Ent1, vB_SenS-Ent2, vB_SenS-Ent3, vB_SenS_AG11, wksl3, FSL_SP-031_SOS, FSL_SP-038_SOS, FSL_SP-049_SOS, EK99P-1, EP23, HK578, JL1, SO-1, SSL-2009a |
 DMS3 (16) | DMS3, D3112, F_HA0480sp-Pa1651, JBD24, JBD26, JBD30, JBD5, JBD88A, JD024, LPB1, MP22, MP29, MP38, MP42, MP48, PA1-KOR-2010 |
 P2 (15) | P2, ENT90, ST79, Fels-2, L-413C, PsP3, RE-2010, Wphi, fiAA91-ss, KL3, KS14, phi52237, phiE12–2, phiE202, phiCTX |
 JH2 (11) | JH2, EC6, FO1a, FSL_SP-010, FSL_SP-012, FSL_SP-107, Felix01, Moogle, Mushroom, UAB_phi87, WV8 |
 T5a (10) | T5, My1, DT57C, EPS7, SPC35, Stitch, bV_EcoS_AKFV33, vB_EcoS_FFH1, Shivani_SOS, phiR201_SOS |
 BcepNazgula (10) | BcepNazgul, 73, vB_Pae-Kakheti25, vB_PaeS_SCH_Ab26, KL1, HK639, mEP390, PY100, AF, AH2_SOS |
 phiKMV (9) | phiKMV, LKD16, Luz19, MPK6, MPK7, PT2, PT5, phikF77, vB_Pae-TbilisiM32 |
 Chi (8) | Chi, SSU5, Enc34, FSL_SP-030, FSL_SP-088, FSL_SP-124, iEPS5, Redjac |
 F1 (8) | F1, Bk, Fz, Pr, R/C, S708, Tb, Wb |
 Mu (7) | Mu, D108, ENT47670, SfIV, SfV, APSE-1, APSE-2 |
 CP1 (7) | CP1, phiL7, OP1, Xop411, Xp10, Prado, Paz |
 phiCbk (6) | phiCbk, CCrKarma, CcrMagneto, CcrSwift, CCrColossus, CcrRogue |
 PR3 (5) | PR3(tecti), PR4(tecti), PR5(tecti), PR772(tecti), PRD1(tecti) |
 Groups of 4 | (Bcep1, Bcep43, Bcep781, BcepNY3), (CP8, CP30A, CPX, NCTC12673), (PAK_P1, JG004, PAK_P5, vB_PaeM_C2–10_Ab1), (9NA, ESSI-2, FSL_SP-062, FSL_SP-069), (NJ01, ECBP2, KBNP1711, PhiEco32), (MSW-3, PEi2, vB_AsaM-56, JD001_SOS)a |
 Groups of 3 | (K139, Kappa, VPUSM_8), (phiEa104, PhiEa21–4, vB_EamM-M7), (Era103, phiEA100, phiEa1H), (phiHSIC, Jenny_12G5, pYD38-B) |
 Groups of 2 | (KPP23, RDJL_Phi_1), (phi1402, phi1422), (phi92, phAPEC8), (phiAS7, phiR8–01), (phiMHaA1, vB_MhM_1152AP), (HP1, HP2), (P1, P7), (Aaphi23, S1249), (pIS4-A, pYD38-A), (PAP2, 119X), (PM1, phiEcoM-GJ1), (RSB1, Cd1b) (Bf7, phi2, LKA1b), (SuMu, vB_EamM-Y2b), (DFL12phi1, EE36P1_SOS)a, (Salvo, Sano_SOS)a |
 Singletons | Ea35–70, OBP, EL, Xp15, phiKZ, 201phi2–1, phiJL001, 9 g, vB_XveM_DIBBI, KS10, PBC5, Kpp25, OP2, phi80–18, vB_RleM_PPF1, BcepGomr, vB_CsaP_GAP52, 7–11, vB_CskP_GAP227, PhiO18P, Presley, RSB3, vB_VpaS_MAR10, RSJ2, vB_RleS_L338C, vB_RglS_P106B, PhiPsa374, phi1M2–2 |
Separated | |
 T4 (47) | T4, phiAS5, Ac42, Moon, CC2, CC31, PG7, 65, AR1, ECML-134, JSE, PS2, PST, Phi1, RB14, RB32, RB49, RB51, Shfl2, T4T, e11–2, ime09, pSs-1, phiD1, vB_EcoM_ACG-C40, wV7, PX29, phiR1-RT, vB_EcoM-VR7, vB_EcoM_VR25, vB_YenM_TG1, 133, Aeh1, Bp7, JS10, JS98, RB69, S16, SP18, STML-198, Shf125875, hx01, ime08, vB_EcoM-VR20, vB_EcoM_JS09, vB_EcoM_PhAPEC2, vB_EcoM_VR26 |
 KP27 (7) | KP27, Lw1, Miller, RB16, RB43, KP15, vB_CsaM_GAP161 |
 rv5 (7) | rv5, 2_JES-2013, Av-05, vB_EcoM-FV3, 4MG, PVP-SE1, vB_CsaM_GAP31 |
 VP4 (7) | VP4, ICP3_2007_A, ICP3_2008_A, ICP3_2009_B, ICP3, N4_(Vibrio), VP3 |
 phiAS4 (6) | phiAS4, 25, 31, 44RR2.8 t, Aes012, Aes508 |
 Groups of 4 | (KVP40, nt-1, VH7D, phi-pp2), (D3, PAJU2, phi297, vB_PaeS_PMG1), (K1–5, K1E, SP6, UAB_phi78_OOS)a |
 Groups of 3 | (CR3, CR9, phiTE), (PBECO_4, 121Q, vB_CsaM_GAP32), (CP21, CP220, CPt10) |
 pVp-1 (2) | pVp-1, phi_3 |
 Singletons | CR5, B40–8, phiR1–37, Marshall, vB_RleM_P10VF, Acj9, 1 M3–16, phage_7–7-1, PhiKO2, BcepF1, Pf-WMP3, PhiP27, F108 |