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Table 6 Identical spanin families

From: Phage spanins: diversity, topological dynamics and gene convergence

Family representative (No. of identical members)

Members

Embedded

 T3 (7)

T3, R, T7M, Y, YpP-R, YpP-Y, phiA1122

 Groups of 4

(SPC32H, SPC32N, SPN1S, SPN9TCW), (933 W, Stx1, Stx2-II, Stx2_converting_phage_vB_EcoP_24B), (Lambda, DE3, HK629, HK630)

 P22 (3)

P22, Phi20, Phi75

 Groups of 2

(phiE125, phi1026b), (SE1, ST104), (Stx2-I, Stx2–86), (ST160, ST64T), (Stx2, 2851), (HK75, HK544), (mEp213, mEp043_c-1), (Yepe2, YpP-G), (BA14, FE44)

Overlapped

 F1 (8)

F1, Bk, Fz, Pr, R-C, S708, Tb, Wb,

 JBD5 (5)

JBD5, F_HA0480sp-Pa1651, MP29, MP48, PA1-KOR-2010,

 Groups of 3

(DMS3, JBD30, MP42), (MP22, JBD88A, MP38), (vB_SenS-Ent1, vB_SenS-Ent2, vB_SenS-Ent3), (Era103, phiEA100, phiEa1H), (Felix01, FO1a, UAB_phi87), (phiKMV, PT5, vB_Pae-TbilisiM32)

 Groups of 2

(K139, Kappa), (phiE12–2, phi52237), (phiMHaA1, vB_MhM_1152AP), (Bcep43, Bcep781), (P1, P7), (SS3e, wksl3), (phiEa104, PhiEa21–4), (FSL_SP-062, FSL_SP-069), (K1ind1, K1ind2), (pIS4-A, pYD38-A), (FSL_SP-010, FSL_SP-012), (Aaphi23, S1249), (Chi, FSL_SP-030)

Separated

 ICP3 (5)

ICP3, ICP3_2007_A, ICP3_2008_A, ICP3_2009_B, N4_(Vibrio),

 Shfl2 (4)

Shfl2, PST, ime09, pSs-1,

 FSL_SP-031 (3)

FSL_SP-031, FSL_SP-038, FSL_SP-049,

 Groups of 2

(PBECO_4, 121Q), (AR1, wV7), (ECML-134, vB_EcoM_ACG-C40), (Miller, RB43), (KP27, KP15), (Aes012, 25), (phiAS4, Aes508), (VP4, VP3)

Unimolecular

 Groups of 2

(bV_EcoS_AHS24, vB_EcoS_Rogue1), (F8, SPM-1), (phi13:2, phi19:3)

  1. Phages representing their identical partners in the non-identical set are highlighted in bold (See methods)