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Table 2 An example of a hierarchical exploration of the yeast network

From: SuperNoder: a tool to discover over-represented modular structures in networks

 

th

Original

L5

L4

L3

L2

L1

Motifs

25

0

290

292

319

377

389

Nodes

25

2361

1781

1776

1607

1583

1333

Edges

25

7182

5234

5305

5018

5020

5322

Motifs

50

0

240

236

304

388

390

Nodes

50

2361

1841

1889

1585

1361

1581

Edges

50

7182

5339

5429

5029

5347

4990

  1. The table reports the number of found motifs, the number of nodes and edges, when the network is mapped to different levels of the GO terms hierarchy and then reduced. At higher levels (L1 is higher level than L2 etc) more motifs pass the threshold
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BMC Bioinformatics

ISSN: 1471-2105

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