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Table 4 Minimum, maximum and average of normalized similarity scores in the homology group of 4 genes using 8 different settings

From: Efficient inference of homologs in large eukaryotic pan-proteomes

Gene name (ID)

 

d1

d2

d3

d4

d5

d6

d7

d8

AP3 (AT3G54340)

Min

95.1

88.1

79.3

79.3

57.5

57.5

57.5

25.0

Avg

97.0

95.5

91.7

91.7

87.2

87.2

87.2

38.7

Max

98.8

98.8

98.8

98.8

98.8

98.8

98.8

100.0

AG (AT4G18960)

Min

95.1

85.2

75.7

75.7

56.2

45.0

35.0

25.0

Avg

96.7

93.6

90.1

89.3

82.6

62.7

52.2

38.7

Max

99.5

99.5

99.5

98.0

99.5

100.0

100.0

100.0

FLC (AT5G10140)

Min

–

85.1

79.9

65.0

55.0

45.0

35.0

25.0

Avg

–

87.3

85.2

75.1

68.3

62.7

52.2

38.7

Max

–

94.4

94.4

100.0

100.0

100.0

100.0

100.0

UBQ1 (AT3G52590)

Min

98.2

96.9

81.7

81.7

57.2

45.0

35.0

25.1

Avg

99.6

99.3

99.6

99.6

97.2

78.3

72.0

68.5

Max

100.0

100.0

100.0

100.0

100.0

100.0

100.0

100.0