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Table 4 The numbers of given and predicted CC GO-domain associations in thousands (× 103)

From: Computational discovery of direct associations between GO terms and protein domains

Dataset

GO-Domain Associations

CC GO Terms

Domain Entries

 

Pfam

CATH

SCOP

Pfam

CATH

SCOP

Pfam

CATH

SCOP

SIFTS

37

17

10

1.4

1.1

0.9

2.6

1.0

0.7

SIFTS-IEA

38

19

13

1.0

0.8

0.7

3.9

1.6

1.2

SwissProt

251

74

74

2.5

2.3

2.4

8.4

1.2

1.2

SwissProt-IEA

185

55

54

1.8

1.6

1.7

10

1.4

1.3

TrEMBL

179

67

61

1.7

1.6

1.6

7.9

1.2

1.1

TrEMBL-IEA

360

111

94

2.3

2.1

2.1

14

1.6

1.4

Merged

479

151

129

2.7

2.5

2.6

15

2.3

1.8

GODomainMiner

39

10

7.3

2.3

1.7

1.6

8.7

1.8

1.4

InterPro

2.289

0.192

0.237

0.336

0.058

0.064

2.042

0.163

0.208

Overlap

2.085

0.191

0.230

0.335

0.058

0.064

1.878

0.163

0.202