From: Computational discovery of direct associations between GO terms and protein domains
Dataset | GO-Domain Associations | CC GO Terms | Domain Entries | ||||||
---|---|---|---|---|---|---|---|---|---|
Pfam | CATH | SCOP | Pfam | CATH | SCOP | Pfam | CATH | SCOP | |
SIFTS | 37 | 17 | 10 | 1.4 | 1.1 | 0.9 | 2.6 | 1.0 | 0.7 |
SIFTS-IEA | 38 | 19 | 13 | 1.0 | 0.8 | 0.7 | 3.9 | 1.6 | 1.2 |
SwissProt | 251 | 74 | 74 | 2.5 | 2.3 | 2.4 | 8.4 | 1.2 | 1.2 |
SwissProt-IEA | 185 | 55 | 54 | 1.8 | 1.6 | 1.7 | 10 | 1.4 | 1.3 |
TrEMBL | 179 | 67 | 61 | 1.7 | 1.6 | 1.6 | 7.9 | 1.2 | 1.1 |
TrEMBL-IEA | 360 | 111 | 94 | 2.3 | 2.1 | 2.1 | 14 | 1.6 | 1.4 |
Merged | 479 | 151 | 129 | 2.7 | 2.5 | 2.6 | 15 | 2.3 | 1.8 |
GODomainMiner | 39 | 10 | 7.3 | 2.3 | 1.7 | 1.6 | 8.7 | 1.8 | 1.4 |
InterPro | 2.289 | 0.192 | 0.237 | 0.336 | 0.058 | 0.064 | 2.042 | 0.163 | 0.208 |
Overlap | 2.085 | 0.191 | 0.230 | 0.335 | 0.058 | 0.064 | 1.878 | 0.163 | 0.202 |