Table 4 Comparison of clustering accuracy (Rand index) between TM-score and the various 3D descriptors (6 clusters) for the 137 protein structures
Method | K-medoids | Agglomerative | DBScan |
|---|---|---|---|
TM-score | 85.40% | 58.25% | 71.23% |
FPFH | 89.10% | 86.59% | 88.40% |
3DSC | 88.00% | 78.60% | 86.20% |
RSD | 89.5% | 77.32% | 84.67% |
VFH | 83.20% | 65.62% | 76.31% |
Combined Silhouette Weights | 89.70% | 87.42% | 88.67% |
Combined Equal Weights | 89.00% | 85.51% | 88.82% |