Table 4 The input data set used along our experiments
From: DNA sequences alignment in multi-GPUs: acceleration and energy payoff
DNA sequence comparison | chr22 | chr21 | 47M | chrY |
|---|---|---|---|---|
Human size | 51.304.566 | 48.129.895 | 46.944.323 | 59.373.566 |
Human accession # | NC_000022.11 | NC_000021.8 | NC_000021.7 | NC_000024.9 |
Chimpanzee size | 49.737.984 | 46.489.110 | 32.799.110 | 26.342.871 |
Chimpanzee accession # | NC_006489.4 | NC_006488.2 | BA000046.3 | NC_006492.3 |
Petacells | 2.55 | 2.24 | 1.54 | 1.56 |
Score | 31.510.791 | 36.006.054 | 27.206.434 | 1.394.673 |
Length | 51.929.087 | 48.579.349 | 33.583.457 | 2.283.191 |
Coverage | 98.9% | 99.0% | 70.5% | 6.0% |
Matches | 88.5% | 91.9% | 94.4% | 88.1% |
Mismatches | 3.8% | 1.1% | 1.5% | 2.0% |
Gaps | 7.7% | 7.1% | 4.1% | 10.0% |