From: ENVirT: inference of ecological characteristics of viruses from metagenomic data
Input parameters (expected result) | ENVirT | PHACCS | CatchAll | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L 0 | M 0 | T 0 | d 0 | Evenness | f max | M | T | d | S min | M | T | d | S min | M |
12500 | 300 | exp | 0.030 | 0.790 | 2.956% | 300 | exp | 0.030 | 0.00x10 0 | 4096 | exp | 0.030 | 1.37x10 -3 | 2829.6 p |
12500 | 1000 | log | 0.900 | 0.995 | 0.661% | 1000 | log | 0.900 | 0.00x10 0 | 1000 | log | 0.900 | 0.00x10 0 | 92628.3 c |
12500 | 5000 | lgn | 2.500 | 0.655 | 11.849% | 5000 | lgn | 2.500 | 0.00x10 0 | 23563 | pl | 1.313 | 1.01x10 4 | 3246.1 p |
12500 | 10000 | pl | 0.700 | 0.913 | 1.997% | 10000 | pl | 0.700 | 0.00x10 0 | 10000 | pl | 0.700 | 0.00x10 0 | 696.3 p |
50000 | 300 | exp | 0.030 | 0.790 | 2.956% | 300 | exp | 0.030 | 0.00x10 0 | 10000 | exp | 0.030 | 4.31x10 -4 | 15712.6 p |
50000 | 1000 | log | 0.900 | 0.995 | 0.661% | 1000 | log | 0.900 | 0.00x10 0 | 1000 | log | 0.900 | 0.00x10 0 | n/a |
50000 | 5000 | lgn | 2.500 | 0.655 | 11.849% | 5000 | lgn | 2.500 | 0.00x10 0 | 4996 | lgn | 2.500 | 1.78x10 -3 | 799.8 p |
50000 | 10000 | pl | 0.700 | 0.913 | 1.997% | 10000 | pl | 0.700 | 0.00x10 0 | 10000 | pl | 0.700 | 0.00x10 0 | 413688.9 c |
125000 | 300 | exp | 0.030 | 0.790 | 2.956% | 300 | exp | 0.030 | 0.00x10 0 | 10000 | exp | 0.060 | 1.87x10 -4 | 70340.9 c |
125000 | 1000 | log | 0.900 | 0.995 | 0.661% | 1000 | log | 0.900 | 0.00x10 0 | 1000 | log | 0.900 | 0.00x10 0 | n/a |
125000 | 5000 | lgn | 2.500 | 0.655 | 11.849% | 5000 | lgn | 2.500 | 0.00x10 0 | 5000 | lgn | 2.500 | 0.00x10 0 | 2303.2 p |
125000 | 10000 | pl | 0.700 | 0.913 | 1.997% | 10000 | pl | 0.700 | 0.00x10 0 | 10000 | pl | 0.700 | 0.00x10 0 | n/a |
300000 | 300 | exp | 0.030 | 0.790 | 2.956% | 300 | exp | 0.030 | 0.00x10 0 | 4096 | exp | 0.030 | 7.92x10 -5 | 160243.9 c |
300000 | 1000 | log | 0.900 | 0.995 | 0.661% | 1000 | log | 0.900 | 0.00x10 0 | 1000 | log | 0.900 | 0.00x10 0 | n/a |
300000 | 5000 | lgn | 2.500 | 0.655 | 11.849% | 5000 | lgn | 2.500 | 0.00x10 0 | 5000 | lgn | 2.500 | 0.00x10 0 | 146552.7 c |
300000 | 10000 | pl | 0.700 | 0.913 | 1.997% | 8547 | pl | 0.689 | 3.00x10 -3 | 10000 | pl | 0.700 | 0.00x10 0 | n/a |