Table 3 Summary of hsegHMM-N, hsegHMM-T, and hsegHMM-T _A/AB models of a renal cell carcinoma sample: hsegHMM-T _A/AB indicates the hsegHMM-T with A and AB state space; Est and logL represent estimated values for parameters and log-likelihood function values given all the estimates, respectively ; ψ is the ploidy and α is the tumor purity; κ² is the variance component of logR in hsegHMM-T; V(W) and τ² are the variance of logR and logOR in both models, respectively; SE _H indicates the average asymptotic standard errors of estimates based on the Hessian matrices

ψ

1.62

0.003

1.61

0.003

1.60

0.003

α

0.87

0.002

0.88

0.002

0.88

0.002

κ ²

N/A

0.16

0.002

0.17

0.003

V(W)

0.25

0.002

0.26^a

0.003 ^b

0.27^a

0.003 ^b

τ ²

0.57

0.012

0.58

0.012

0.57

0.014

v

N/A

5.50

0.185

5.48

0.218

AIC

64682.17

63120.48

62923.90

BIC

65934.07

64380.89

62992.03