Skip to main content

Table 2 Performance (R2 values) of machine learning models trained to predict alpha diversity from SEDE-GPS output

From: SEDE-GPS: socio-economic data enrichment based on GPS information

Dataset glmnet blasso svmRadial svmLinear knn rpart treebag rf gbm xgbTree
Euk Chao1 0.292 0.003 0.713 0.980 0.0415 0.214 0.631 0.518 0.496 0.999
Euk Shannon 0.228 0.0167 0.791 0.993 0.000 0.180 0.635 0.582 0.680 1.000
Euk Simpson_e 0.277 0.0146 0.556 0.976 0.107 0.238 0.671 0.559 0.546 0.980
Euk Simpson 0.150 0.001 0.742 0.906 0.014 0.090 0.545 0.346 0.432 0.995
Prok Chao1 0.768 0.461 0.832 0.991 0.0695 0.420 0.635 0.915 0.955 0.979
Prok Shannon 0.527 0.011 0.940 0.991 0.172 0.538 0.626 0.930 0.993 0.999
Prok Simpson_e 0.345 0.128 0.849 0.991 0.035 0.304 0.622 0.937 0.840 0.999
Prok Simpson 0.459 0.008 0.915 0.986 0.168 0.453 0.627 0.904 0.880 0.991