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Table 2 Functional description similarity between tomato and grapevine orthologs

From: Multilevel comparative bioinformatics to investigate evolutionary relationships and specificities in gene annotations: an example for tomato and grapevine

Functional Annotation dentity percentage

Number of orthology relationships

Description examples

100 (%)

8652

Photosystem II D2 protein

Photosystem II D2 protein

80–99 (%)

1087

E3 ubiquitin-protein ligase RING1

E3 ubiquitin-protein ligase RING1-like

60–79 (%)

322

Probable pectate lyase P59

Pectate lyase

40–59 (%)

1442

Germin-like protein subfamily 1 member 14

Putative germin-like protein 2–1

20–39 (%)

4782

9-divinyl ether synthase

Allene oxide synthase, chloroplastic

0–19 (%)

1629

Metal transporter Nramp6

Cinnamoyl-CoA reductase 1

  1. Summary of the functional description similarity between tomato and grapevine orthologs, based on software inspection of matching fonts between tomato and grapevine