BMC Bioinformatics

Table 3 Tomato and grapevine genome annotation versions

From: Multilevel comparative bioinformatics to investigate evolutionary relationships and specificities in gene annotations: an example for tomato and grapevine

Database	Tomato	Grapevine
PHYTOZOME	iTAG 2.4	Genoscope v2 = CRIBI v0
PLAZA	iTAG 2.4	Genoscope v1
ENSEMBL PLANTS	iTAG 2.4	CRIBI v1
GRAMENE	iTAG 2.4	CRIBI v1
PLANTGDB	GenBank Release 160.0	Genoscope v2 = CRIBI v0
GREENPHYL	iTAG 2.3	Genoscope v2 = CRIBI v0
EGGNOG	iTAG 2.4	CRIBI v1
INPARANOID	iTAG 2.4	CRIBI v1

Tomato and grapevine genome annotation versions available in most used comparative databases

Back to article page

ISSN: 1471-2105

Contact us

General enquiries: journalsubmissions@springernature.com