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Fig. 8 | BMC Bioinformatics

Fig. 8

From: SWIM tool application to expression data of glioblastoma stem-like cell lines, corresponding primary tumors and conventional glioma cell lines

Fig. 8

Analysis of switch genes expression of GBM subtypes. a-b Dendrograms and heat map for switch genes for microarray expression data of Verhaak et al. dataset [27] (a) and for GBM RNA-seq data provided by TCGA (b). The expression profiles of switch genes are clustered according to rows (switch genes) and columns (subtype samples) by using as distance metrics 1- ρ, where ρ is the Pearson correlation. Heatmap colors represent different expression levels (z-score normalized) that increase from blue to yellow

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BMC Bioinformatics

ISSN: 1471-2105

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