Table 7 There are a total of 27 cases for generating 3 sub-sequences by 3 haplotypes
From: HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations
Haplotypes which generate the sub-sequences | Expected frequencies | |||||
|---|---|---|---|---|---|---|
Case | subseq1 | subseq2 | subseq3 | subseq1 | subseq2 | subseq3 |
1 | h 1 | h 2 | h 3 | f 1 | f 2 | f 3 |
2 | h 1 | h 3 | h 2 | f 1 | f 3 | f 2 |
3 | h 2 | h 1 | h 3 | f 2 | f 1 | f 3 |
4 | h 2 | h 3 | h 1 | f 2 | f 3 | f 1 |
5 | h 3 | h 1 | h 2 | f 3 | f 1 | f 2 |
6 | h 3 | h 2 | h 1 | f 3 | f 2 | f 1 |
7 | h1 & h2 | h 3 | Erroneous | f1+f2 | f 3 | f e |
8 | h 3 | h1 & h2 | Erroneous | f 3 | f1+f2 | f e |
⋯ | ⋯ | ⋯ | ⋯ | ⋯ | ⋯ | ⋯ |
26 | Erroneous | h1 & h2 & h3 | Erroneous | f e | f1+f2+f3 | \(f_{e^{\prime }}\) |
27 | Erroneous | Erroneous | h1 & h2 & h3 | f e | \(f_{e^{\prime }}\) | f1+f2+f3 |