From: SIFR annotator: ontology-based semantic annotation of French biomedical text and clinical notes
 | Plain Entity Recognition [PER] | Normalized Entity Recognition [NER] | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
P | R | F1 | P | R | F1 | P | R | F1 | P | R | F1 | |
 | EMEA | EMEA adapted | EMEA | EMEA adapted | ||||||||
BSL | 64.0 | 51.7 | 57.2 | 63.1 | 59.3 | 61.2 | 49.8 | 30.9 | 37.8 | 48.6 | 35.1 | 40.8 |
DAA | 58.3 | 51.6 | 54.8 | 57.5 | 59.3 | 58.4 | 45.0 | 30.7 | 36.2 | 44.0 | 34.8 | 38.8 |
DBP | 70.8 | 56.2 | 62.6 | 69.2 | 64.0 | 66.7 | 54.21 | 31.0 | 39.4 | 54.1 | 35.36 | 42.8 |
Avg. | 58.7 | 47.3 | 51.1 | Not Available | 33.3 | 46.0 | 34.7 | Not Available | ||||
Med. | 73.1 | 55.9 | 61.3 | 19.1 | 56.5 | 25.2 | ||||||
 | MEDLINE | MEDLINE adapted | MEDLINE | MEDLINE adapted | ||||||||
BSL | 57.5 | 49.0 | 52.9 | 55.2 | 55.8 | 55.5 | 44.0 | 30.5 | 36.0 | 43.8 | 35.5 | 39.2 |
DAA | 67.9 | 49.0 | 56.9 | 62.2 | 55.8 | 60.2 | 52.9 | 30.5 | 38.7 | 52.7 | 35.5 | 42.4 |
DBP | 64.7 | 54.0 | 58.9 | 62.0 | 61.1 | 61.5 | 49.5 | 30.4 | 37.6 | 49.25 | 35.4 | 41.2 |
Avg. | 53.3 | 39.6 | 44.0 | Not Available | 32.1 | 46.1 | 34.0 | Not Available | ||||
Med. | 64.9 | 40.0 | 48.7 | 29.5 | 59.0 | 22.8 |