Fig. 5
From: Assessing the impact of exact reads on reducing the error rate of read mapping
The comparison of contigs generated by Bowtie2 and EIM on the regions of Chr1. Firstly, Chr1 was divided to some regions, pi1≤i≤25. Secondly, Bowtie2 and EIM were run by the read set of Chr1 and each pi1≤i≤25andi≠14, separately. Finally, the quality and contiguity of contigs were computed as a N50 size b The Remapped-Reads value c The number of IUPAC codes d The number of errors