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Table 1 List of data sets used in the current study

From: Single sample scoring of molecular phenotypes

Data

Source

Date accessed

Reference

TCGA RNA-seq

The UCSC Cancer Genomics Browser [30]

February 2016

PMID: 23000897

TCGA microarray

The UCSC Cancer Genomics Browser [30]

October 2015

PMID: 23000897

CCLE RNA-seq

Cancer Cell Line Data Repository [31]

April 2017

PMID: 22460905

Daemen et al. RNA-seq

Gene Expression Omnibus [32] ID: GSE48213

July 2016

PMID: 24176112

TGFβ-EMT

Data [33] from Foroutan et al. [8]

September 2017

PMID: 28119430

GSE79235

Gene Expression Omnibus [32]

April 2018

PMID: 27154822