From: Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis
Tracks collection | Genome | Avg size of genomic intervals relatively to the track size (bp) | Avg overlap with gaps (bp) | Avg overlap with the start region of gaps (bp) | Avg overlap with the end region of gaps (bp) | Avg overlap with the middle portion of gaps (bp) | Overlap hotspot | Overlap hotspot value (bp) |
---|---|---|---|---|---|---|---|---|
Histone modifications | hg19 | 7.43e-06 | 0.0014 | 0.0029 | 0.0023 | 0.0011 | chr4:40296396-40297096 | 0.0591 |
TFBS in K562 | Â | 3.89e-04 | 0.0046 | 0.0059 | 0.0053 | 0.0046 | chr7:139379377-139404377 | 0.0448 |
DNase I hypersensitive sites | Â | 5.52e-06 | 4.49e-06 | 3.28e-05 | 1.21e-05 | 0 | chr3:194041961-194047251 | 0.0007 |
DNase I hypersensitive sites | hg38 | 4.68e-06 | 0.0024 | 0.0026 | 0.0023 | 0.0024 | chr17:21976511-21976531 | 0.9732 |