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Table 4 HCV-GLUE clade categories for MLCA

From: GLUE: a flexible software system for virus sequence data

Clade Number Distance Distance scaling Final clade
category of clades cut-off d exponent s cut-off f
Genotype 7 0.4 -3.0 80%
Subtype 139 0.26 -3.0 80%
  1. The Subtype category comprises 84 confirmed, 13 provisional and 42 unassigned subtypes, Also shown are category-specific numeric parameters for the neighbour-weighting step