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Table 4 HCV-GLUE clade categories for MLCA

From: GLUE: a flexible software system for virus sequence data

Clade

Number

Distance

Distance scaling

Final clade

category

of clades

cut-off d

exponent s

cut-off f

Genotype

7

0.4

-3.0

80%

Subtype

139

0.26

-3.0

80%

  1. The Subtype category comprises 84 confirmed, 13 provisional and 42 unassigned subtypes, Also shown are category-specific numeric parameters for the neighbour-weighting step