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Table 5 Comparison of HCV-GLUE genotype assignment with GenBank Metadata and assignment from ViPR

From: GLUE: a flexible software system for virus sequence data

Methods giving Method agreement Number of sequences
non-null assignment results   
Metadata & HCV-GLUE & ViPR Metadata = HCV-GLUE = ViPR 60 464
  Metadata = HCV-GLUE ≠ ViPR 518
  Metadata ≠ HCV-GLUE = ViPR 71
  Metadata = ViPR ≠ HCV-GLUE 0
  Metadata ≠ HCV-GLUE ≠ ViPR 2
  Total 61 055
Metadata & HCV-GLUE Metadata = HCV-GLUE 5019
  Metadata ≠ HCV-GLUE 26
  Total 5045
Metadata & ViPR Metadata = ViPR 6
  Metadata ≠ ViPR 7
  Total 13
HCV-GLUE & ViPR HCV-GLUE = ViPR 13 977
  HCV-GLUE ≠ ViPR 986
  Total 14 963
Metadata only Total 25
HCV-GLUE only Total 1792
ViPR only Total 4
All assignment results null Total 31
  Grand total 82 928