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Table 1 Pipeline runtimes and peak RAM usage for Redundans and Purge Haplotigs

From: Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies

 

Diploid genome size (Mbp)

Redundans

Purge Haplotigs

Runtime (hh:mm:ss)

Peak RAM (GB)

Runtime (hh:mm:ss)

Peak RAM (GB)

C. pyxidata

65.4

00:01:54

1

00:01:04

10

A. thaliana

245

00:35:56

1

00:04:17

30

V. vinifera

959

15:48:27

6

00:34:40

47

T. guttata

1983

06:14:06

6

01:04:51

60